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Ingeborgh"},"authorAffiliation":{"typeName":"authorAffiliation","multiple":false,"typeClass":"primitive","value":"The Rotterdam Ophthalmic Institute"}},{"authorName":{"typeName":"authorName","multiple":false,"typeClass":"primitive","value":"Verhoeven, Virginie J.M."},"authorAffiliation":{"typeName":"authorAffiliation","multiple":false,"typeClass":"primitive","value":"Erasmus MC"}},{"authorName":{"typeName":"authorName","multiple":false,"typeClass":"primitive","value":"Thiadens, Alberta A.H.J."},"authorAffiliation":{"typeName":"authorAffiliation","multiple":false,"typeClass":"primitive","value":"Erasmus MC"}},{"authorName":{"typeName":"authorName","multiple":false,"typeClass":"primitive","value":"Durand, Marine"},"authorAffiliation":{"typeName":"authorAffiliation","multiple":false,"typeClass":"primitive","value":"Imagine Eyes"}},{"authorName":{"typeName":"authorName","multiple":false,"typeClass":"primitive","value":"Chateau, Nicolas"},"authorAffiliation":{"typeName":"authorAffiliation","multiple":false,"typeClass":"primitive","value":"Imagine Eyes"}},{"authorName":{"typeName":"authorName","multiple":false,"typeClass":"primitive","value":"van Walsum, Theo"},"authorAffiliation":{"typeName":"authorAffiliation","multiple":false,"typeClass":"primitive","value":"Erasmus MC"}},{"authorName":{"typeName":"authorName","multiple":false,"typeClass":"primitive","value":"Andrade De Jesus, Danilo"},"authorAffiliation":{"typeName":"authorAffiliation","multiple":false,"typeClass":"primitive","value":"Erasmus MC"}},{"authorName":{"typeName":"authorName","multiple":false,"typeClass":"primitive","value":"Sánchez Brea, Luisa"},"authorAffiliation":{"typeName":"authorAffiliation","multiple":false,"typeClass":"primitive","value":"Erasmus MC"}}]},{"typeName":"datasetContact","multiple":true,"typeClass":"compound","value":[{"datasetContactName":{"typeName":"datasetContactName","multiple":false,"typeClass":"primitive","value":"Andrade de Jesus, Danilo"},"datasetContactAffiliation":{"typeName":"datasetContactAffiliation","multiple":false,"typeClass":"primitive","value":"Erasmus MC"}},{"datasetContactName":{"typeName":"datasetContactName","multiple":false,"typeClass":"primitive","value":"Sanchez Brea, Luisa"},"datasetContactAffiliation":{"typeName":"datasetContactAffiliation","multiple":false,"typeClass":"primitive","value":"Erasmus MC"}}]},{"typeName":"dsDescription","multiple":true,"typeClass":"compound","value":[{"dsDescriptionValue":{"typeName":"dsDescriptionValue","multiple":false,"typeClass":"primitive","value":"The dataset is made available and consists of two partitions, a training and a testing dataset. The training dataset contains 625 annotated patches (from 20 images from 18 subjects) and the testing dataset contains 54 annotated patches (from 18 images from 18 subjects). The testing dataset contains annotations from four different graders. Further information about the annotations can be found in paper.<br><br>\n\n<ul>\n<li>Training: The training image patches are individual .tiff files with the dimension of (128x128 pixels). Use any tiff-reader you want.</li>\n<li>Test: The test image patches and annotations are .tiff files with the dimensions of (3x128x128). NOTE: Need to be loaded using imageio.mimread()</li>\n</ul> <br> <br>\n\nLink to code: <a>https://gitlab.com/radiology/eye/ao-vision/ao-fio-conedetect</a> <br> <br>\n\n\nPython to load the image files.\n<code><br>\nimport imageio <br>\nimport tifffile  <br>  <br>\n\n\n# Training-dataset images  <br>\nimage_training_path = \"path/to/data/image.tiff\"  <br>\nimage_array = tifffile.imread(image_training_path)  <br> <br>\n\n# Test-dataset images <br>\nimage_test_path = \"path/to/data/image.tiff\"  <br>\nimage_array = imageio.mimread(image_test_path) # Not using mimread will lead to wrong loading of the tiff-file <br>\n</code>"}}]},{"typeName":"subject","multiple":true,"typeClass":"controlledVocabulary","value":["Computer and Information Science","Medicine, Health and Life Sciences"]},{"typeName":"contributor","multiple":true,"typeClass":"compound","value":[{"contributorType":{"typeName":"contributorType","multiple":false,"typeClass":"controlledVocabulary","value":"Supervisor"},"contributorName":{"typeName":"contributorName","multiple":false,"typeClass":"primitive","value":"Sanchez Brea, Luisa"}},{"contributorType":{"typeName":"contributorType","multiple":false,"typeClass":"controlledVocabulary","value":"Supervisor"},"contributorName":{"typeName":"contributorName","multiple":false,"typeClass":"primitive","value":"Andrade de Jesus, Danilo"}}]},{"typeName":"grantNumber","multiple":true,"typeClass":"compound","value":[{"grantNumberAgency":{"typeName":"grantNumberAgency","multiple":false,"typeClass":"primitive","value":"Health Holland, Top Sector Life Sciences & Health"},"grantNumberValue":{"typeName":"grantNumberValue","multiple":false,"typeClass":"primitive","value":"EMCLSH22014"}}]},{"typeName":"depositor","multiple":false,"typeClass":"primitive","value":"Wooning, Sander"},{"typeName":"dateOfDeposit","multiple":false,"typeClass":"primitive","value":"2024-05-15"},{"typeName":"dataSources","multiple":true,"typeClass":"primitive","value":["Images acquired by RTX1 Adaptive Optics Retinal Camera"]}]},"dansDataVaultMetadata":{"displayName":"Data Vault Metadata","name":"dansDataVaultMetadata","fields":[{"typeName":"dansDataversePid","multiple":false,"typeClass":"primitive","value":"doi:10.34894/2GXEDZ"},{"typeName":"dansDataversePidVersion","multiple":false,"typeClass":"primitive","value":"1.0"},{"typeName":"dansBagId","multiple":false,"typeClass":"primitive","value":"urn:uuid:d9cb39e1-cc41-4d4e-8d95-4f40b9a57c27"},{"typeName":"dansNbn","multiple":false,"typeClass":"primitive","value":"urn:nbn:nl:ui:13-9d59b718-e5e0-4f13-8d27-ee73b14aee6d"}]}},"files":[{"description":"Zip file containing all testing images and annotations in TIFF format from 4 different graders, AOdetect and AO-FIO ConeDetect","label":"testset.zip","restricted":true,"version":2,"datasetVersionId":27790,"dataFile":{"id":424258,"persistentId":"","filename":"testset.zip","contentType":"application/zip","friendlyType":"ZIP Archive","filesize":35838886,"description":"Zip file containing all testing images and annotations in TIFF format from 4 different graders, AOdetect and AO-FIO ConeDetect","storageIdentifier":"surf://store:18faa9cd373-17cc029b883b","rootDataFileId":-1,"checksum":{"type":"SHA-1","value":"274a09dd72841549826c5232446682ee541773df"},"tabularData":false,"creationDate":"2024-05-24","publicationDate":"2024-05-24","lastUpdateTime":"2024-05-24T15:24:47Z","fileAccessRequest":true}},{"description":"Zip file containing all training images and annotations in TIFF format","label":"trainset.zip","restricted":true,"version":2,"datasetVersionId":27790,"dataFile":{"id":424257,"persistentId":"","filename":"trainset.zip","contentType":"application/zip","friendlyType":"ZIP Archive","filesize":9703970,"description":"Zip file containing all training images and annotations in TIFF format","storageIdentifier":"surf://store:18faa9cd20a-2915a4275cf7","rootDataFileId":-1,"checksum":{"type":"SHA-1","value":"057a18e474c6e162c97bc8e2890e4690ea0356ea"},"tabularData":false,"creationDate":"2024-05-24","publicationDate":"2024-05-24","lastUpdateTime":"2024-05-24T15:24:47Z","fileAccessRequest":true}}]}}}